J4_8ZEJ_002

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8ZEJ|1|A|C|183, 8ZEJ|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|A|G|142
8ZEJ|1|A|A|143
8ZEJ|1|A|G|144
*
8ZEJ|1|A|C|178
8ZEJ|1|A|A|179
8ZEJ|1|A|U|180
8ZEJ|1|A|A|181
8ZEJ|1|A|A|182
8ZEJ|1|A|C|183
8ZEJ|1|A|G|184
*
8ZEJ|1|A|C|193
8ZEJ|1|A|C|194
8ZEJ|1|A|A|195
8ZEJ|1|A|A|196
8ZEJ|1|A|A|197
8ZEJ|1|A|G|198
*
8ZEJ|1|A|U|219
8ZEJ|1|A|G|220
8ZEJ|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20