J4_8ZFI_016
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 8ZFI|1|b|A|2288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZFI|1|b|C|2285
8ZFI|1|b|G|2286
8ZFI|1|b|A|2287
8ZFI|1|b|A|2288
8ZFI|1|b|G|2289
*
8ZFI|1|b|U|2343
8ZFI|1|b|U|2344
8ZFI|1|b|G|2345
8ZFI|1|b|A|2346
8ZFI|1|b|C|2347
*
8ZFI|1|b|G|2370
8ZFI|1|b|G|2371
8ZFI|1|b|U|2372
*
8ZFI|1|b|A|2381
8ZFI|1|b|G|2382
8ZFI|1|b|G|2383
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 5
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain p
- 50S ribosomal protein L18
- Chain y
- 50S ribosomal protein L27
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