J4_8ZGR_010
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAUUAAAUC*GCC*GUAAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 8ZGR|1|S2|A|359
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGR|1|S2|C|99
8ZGR|1|S2|A|100
8ZGR|1|S2|U|101
8ZGR|1|S2|U|102
8ZGR|1|S2|A|103
8ZGR|1|S2|A|104
8ZGR|1|S2|A|105
8ZGR|1|S2|U|106
8ZGR|1|S2|C|107
*
8ZGR|1|S2|G|307
8ZGR|1|S2|C|308
8ZGR|1|S2|C|309
*
8ZGR|1|S2|G|357
8ZGR|1|S2|U|358
8ZGR|1|S2|A|359
8ZGR|1|S2|A|360
8ZGR|1|S2|C|361
*
8ZGR|1|S2|G|383
8ZGR|1|S2|G|384
Current chains
- Chain S2
- chain 2 18S rRNA (1800-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SV
- Small ribosomal subunit protein eS8A
- Chain SX
- Small ribosomal subunit protein uS17A
- Chain Sc
- Small ribosomal subunit protein uS12A
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