J4_9B50_006

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9B50|1|BA|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|C|601
9B50|1|BA|A|602
9B50|1|BA|A|603
9B50|1|BA|G|604
*
9B50|1|BA|C|624
9B50|1|BA|G|625
9B50|1|BA|A|626
9B50|1|BA|A|627
9B50|1|BA|G|628
*
9B50|1|BA|C|635
9B50|1|BA|G|636
9B50|1|BA|A|637
9B50|1|BA|G|638
*
9B50|1|BA|C|650
9B50|1|BA|G|651
9B50|1|BA|U|652
9B50|1|BA|U|653
9B50|1|BA|A|654
9B50|1|BA|A|655
9B50|1|BA|G|656

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15