J4_9B50_007

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAUAAA*UC*GCUU*AG

Length

15 nucleotides

Bulged bases

9B50|1|BA|G|1271, 9B50|1|BA|A|1272, 9B50|1|BA|U|1273, 9B50|1|BA|A|1275, 9B50|1|BA|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|C|1270
9B50|1|BA|G|1271
9B50|1|BA|A|1272
9B50|1|BA|U|1273
9B50|1|BA|A|1274
9B50|1|BA|A|1275
9B50|1|BA|A|1276
*
9B50|1|BA|U|1294
9B50|1|BA|C|1295
*
9B50|1|BA|G|1645
9B50|1|BA|C|1646
9B50|1|BA|U|1647
9B50|1|BA|U|1648
*
9B50|1|BA|A|2009
9B50|1|BA|G|2010

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BN

50S ribosomal protein L17

Chain BS

50S ribosomal protein L22