J4_9B51_016

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

9B51|1|BA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B51|1|BA|C|2285
9B51|1|BA|G|2286
9B51|1|BA|A|2287
9B51|1|BA|A|2288
9B51|1|BA|G|2289
*
9B51|1|BA|U|2343
9B51|1|BA|U|2344
9B51|1|BA|G|2345
9B51|1|BA|A|2346
9B51|1|BA|C|2347
*
9B51|1|BA|G|2370
9B51|1|BA|G|2371
9B51|1|BA|U|2372
*
9B51|1|BA|A|2381
9B51|1|BA|G|2382
9B51|1|BA|G|2383

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BO

50S ribosomal protein L18

Chain BW

50S ribosomal protein L27