J4_9G1Z_010
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUUAAAUC*GCC*GUAAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 9G1Z|1|A|A|357
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9G1Z_010 not in the Motif Atlas
- Homologous match to J4_8CRE_021
- Geometric discrepancy: 0.0762
- The information below is about J4_8CRE_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_15241.2
- Basepair signature
- cWW-cSH-tHS-cWW-F-F-tHW-F-cWW-tHW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
9G1Z|1|A|C|99
9G1Z|1|A|A|100
9G1Z|1|A|U|101
9G1Z|1|A|U|102
9G1Z|1|A|A|103
9G1Z|1|A|A|104
9G1Z|1|A|A|105
9G1Z|1|A|U|106
9G1Z|1|A|C|107
*
9G1Z|1|A|G|305
9G1Z|1|A|C|306
9G1Z|1|A|C|307
*
9G1Z|1|A|G|355
9G1Z|1|A|U|356
9G1Z|1|A|A|357
9G1Z|1|A|A|358
9G1Z|1|A|C|359
*
9G1Z|1|A|G|381
9G1Z|1|A|G|382
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain J
- 40S ribosomal protein S8
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: