J4_9GR1_013
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- AACUG*CACAG*UGAC*GUAAU
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9GR1_013 not in the Motif Atlas
- Homologous match to J4_5J7L_025
- Geometric discrepancy: 0.0317
- The information below is about J4_5J7L_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61477.5
- Basepair signature
- cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
9GR1|1|a|A|1774
9GR1|1|a|A|1775
9GR1|1|a|C|1776
9GR1|1|a|U|1777
9GR1|1|a|G|1778
*
9GR1|1|a|C|1790
9GR1|1|a|A|1791
9GR1|1|a|C|1792
9GR1|1|a|A|1793
9GR1|1|a|G|1794
*
9GR1|1|a|U|1829
9GR1|1|a|G|1830
9GR1|1|a|A|1831
9GR1|1|a|C|1832
*
9GR1|1|a|G|1979
9GR1|1|a|U|1980
9GR1|1|a|A|1981
9GR1|1|a|A|1982
9GR1|1|a|U|1983
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain c
- 50S ribosomal protein L2
Coloring options: