J4_9I3L_004

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9I3L|1|b|A|656

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I3L|1|b|C|603
9I3L|1|b|A|604
9I3L|1|b|A|605
9I3L|1|b|G|606
*
9I3L|1|b|C|626
9I3L|1|b|G|627
9I3L|1|b|A|628
9I3L|1|b|A|629
9I3L|1|b|G|630
*
9I3L|1|b|C|637
9I3L|1|b|G|638
9I3L|1|b|A|639
9I3L|1|b|G|640
*
9I3L|1|b|C|652
9I3L|1|b|G|653
9I3L|1|b|U|654
9I3L|1|b|U|655
9I3L|1|b|A|656
9I3L|1|b|A|657
9I3L|1|b|G|658

Current chains

Chain b

23S rRNA

Nearby chains

Chain 7

Large ribosomal subunit protein bL35

Chain e

Large ribosomal subunit protein uL4

Chain l

Large ribosomal subunit protein uL15