J4_9I3L_012

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I3L|1|b|G|2647
9I3L|1|b|G|2648
9I3L|1|b|G|2649
9I3L|1|b|C|2650
*
9I3L|1|b|G|2678
9I3L|1|b|A|2679
9I3L|1|b|C|2680
*
9I3L|1|b|G|2735
9I3L|1|b|G|2736
9I3L|1|b|A|2737
9I3L|1|b|A|2738
9I3L|1|b|G|2739
*
9I3L|1|b|U|2773
9I3L|1|b|G|2774
9I3L|1|b|C|2775

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain j

Large ribosomal subunit protein uL13

Chain k

Large ribosomal subunit protein uL14