J4_9K0Z_013

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CAAAG*UUGAC*GGG*CGG

Length

16 nucleotides

Bulged bases

9K0Z|1|h|A|2512

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|C|2509
9K0Z|1|h|A|2510
9K0Z|1|h|A|2511
9K0Z|1|h|A|2512
9K0Z|1|h|G|2513
*
9K0Z|1|h|U|2567
9K0Z|1|h|U|2568
9K0Z|1|h|G|2569
9K0Z|1|h|A|2570
9K0Z|1|h|C|2571
*
9K0Z|1|h|G|2594
9K0Z|1|h|G|2595
9K0Z|1|h|G|2596
*
9K0Z|1|h|C|2605
9K0Z|1|h|G|2606
9K0Z|1|h|G|2607

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain X

Large ribosomal subunit protein bL27

Chain c

Large ribosomal subunit protein bL33A

Chain e

Large ribosomal subunit protein bL35

Chain v

Large ribosomal subunit protein uL18