J4_9N9J_007

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACUG*CAAAG*UGAUU*AUGAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|3634
9N9J|1|L5|A|3635
9N9J|1|L5|C|3636
9N9J|1|L5|U|3637
9N9J|1|L5|G|3638
*
9N9J|1|L5|C|3650
9N9J|1|L5|A|3651
9N9J|1|L5|A|3652
9N9J|1|L5|A|3653
9N9J|1|L5|G|3654
*
9N9J|1|L5|U|3690
9N9J|1|L5|G|3691
9N9J|1|L5|A|3692
9N9J|1|L5|U|3693
9N9J|1|L5|U|3694
*
9N9J|1|L5|A|3821
9N9J|1|L5|U|3822
9N9J|1|L5|G|3823
9N9J|1|L5|A|3824
9N9J|1|L5|A|3825
9N9J|1|L5|C|3826

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

Small ribosomal subunit protein eS32

Chain Lp

Large ribosomal subunit protein eL43