J4_9N9J_008

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUG*CG*CUUAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

9N9J|1|L5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|C|3696
9N9J|1|L5|U|3697
9N9J|1|L5|G|3698
*
9N9J|1|L5|C|3752
9N9J|1|L5|G|3753
*
9N9J|1|L5|C|3771
9N9J|1|L5|U|3772
9N9J|1|L5|U|3773
9N9J|1|L5|A|3774
9N9J|1|L5|A|3775
9N9J|1|L5|G|3776
9N9J|1|L5|G|3777
9N9J|1|L5|U|3778
9N9J|1|L5|A|3779
9N9J|1|L5|G|3780
*
9N9J|1|L5|U|3814
9N9J|1|L5|G|3815
9N9J|1|L5|A|3816
9N9J|1|L5|A|3817
9N9J|1|L5|U|3818
9N9J|1|L5|G|3819

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

Small ribosomal subunit protein eS32