J4_9QIW_005

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

9QIW|1|L5|U|4677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QIW|1|L5|G|4587
9QIW|1|L5|U|4588
9QIW|1|L5|A|4589
9QIW|1|L5|A|4590
*
9QIW|1|L5|U|4620
9QIW|1|L5|C|4621
*
9QIW|1|L5|G|4676
9QIW|1|L5|U|4677
9QIW|1|L5|G|4678
*
9QIW|1|L5|C|4712
9QIW|1|L5|G|4713
9QIW|1|L5|C|4714
9QIW|1|L5|C|4715

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CE

Protein LLP homolog

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23