J4_9QQA_001

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

C(A2M)UUAAA(PSU)C*GCC*G(PSU)GAC*GG

Length

19 nucleotides

Bulged bases

9QQA|1|A2|G|408

QA status

Modified nucleotides: A2M, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|A2|C|98
9QQA|1|A2|A2M|99
9QQA|1|A2|U|100
9QQA|1|A2|U|101
9QQA|1|A2|A|102
9QQA|1|A2|A|103
9QQA|1|A2|A|104
9QQA|1|A2|PSU|105
9QQA|1|A2|C|106
*
9QQA|1|A2|G|356
9QQA|1|A2|C|357
9QQA|1|A2|C|358
*
9QQA|1|A2|G|406
9QQA|1|A2|PSU|407
9QQA|1|A2|G|408
9QQA|1|A2|A|409
9QQA|1|A2|C|410
*
9QQA|1|A2|G|432
9QQA|1|A2|G|433

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ah

40S ribosomal protein S8

Chain Ak

Small ribosomal subunit protein uS17

Chain Aw

40S ribosomal protein S23