J4_9QQA_002
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AAG*CGAAAG*CCA(PSU)AAACGAUG*UU
- Length
- 23 nucleotides
- Bulged bases
- 9QQA|1|A2|A|673, 9QQA|1|A2|A|1084, 9QQA|1|A2|C|1086, 9QQA|1|A2|A|1088
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQA|1|A2|A|672
9QQA|1|A2|A|673
9QQA|1|A2|G|674
*
9QQA|1|A2|C|1033
9QQA|1|A2|G|1034
9QQA|1|A2|A|1035
9QQA|1|A2|A|1036
9QQA|1|A2|A|1037
9QQA|1|A2|G|1038
*
9QQA|1|A2|C|1079
9QQA|1|A2|C|1080
9QQA|1|A2|A|1081
9QQA|1|A2|PSU|1082
9QQA|1|A2|A|1083
9QQA|1|A2|A|1084
9QQA|1|A2|A|1085
9QQA|1|A2|C|1086
9QQA|1|A2|G|1087
9QQA|1|A2|A|1088
9QQA|1|A2|U|1089
9QQA|1|A2|G|1090
*
9QQA|1|A2|U|1161
9QQA|1|A2|U|1162
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- eS26
- Chain Ak
- Small ribosomal subunit protein uS17
- Chain Am
- Small ribosomal subunit protein uS15
- Chain Av
- Small ribosomal subunit protein uS8
- Chain Aw
- 40S ribosomal protein S23
- Chain Az
- Small ribosomal subunit protein eS32
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bp
- 60S ribosomal protein L37a
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