J4_9QQA_008
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- (OMC)AAAUAU*AGG*(OMC)AUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 9QQA|1|B5|A|2209, 9QQA|1|B5|U|2212, 9QQA|1|B5|U|2671
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQA|1|B5|OMC|2208
9QQA|1|B5|A|2209
9QQA|1|B5|A|2210
9QQA|1|B5|A|2211
9QQA|1|B5|U|2212
9QQA|1|B5|A|2213
9QQA|1|B5|U|2214
*
9QQA|1|B5|A|2232
9QQA|1|B5|G|2233
9QQA|1|B5|G|2234
*
9QQA|1|B5|OMC|2667
9QQA|1|B5|A|2668
9QQA|1|B5|U|2669
9QQA|1|B5|G|2670
9QQA|1|B5|U|2671
9QQA|1|B5|U|2672
*
9QQA|1|B5|A|3588
9QQA|1|B5|G|3589
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BP
- Large ribosomal subunit protein uL22
- Chain BR
- Ribosomal protein L19
- Chain Bd
- 60S ribosomal protein L31
- Chain Nu
- Isoform 2 of Transcription factor BTF3
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