J4_9QQB_016

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUAAG*UUGA(PSU)*ACC*GGG

Length

16 nucleotides

Bulged bases

9QQB|1|B5|A|3980

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|C|3977
9QQB|1|B5|U|3978
9QQB|1|B5|A|3979
9QQB|1|B5|A|3980
9QQB|1|B5|G|3981
*
9QQB|1|B5|U|4035
9QQB|1|B5|U|4036
9QQB|1|B5|G|4037
9QQB|1|B5|A|4038
9QQB|1|B5|PSU|4039
*
9QQB|1|B5|A|4063
9QQB|1|B5|C|4064
9QQB|1|B5|C|4065
*
9QQB|1|B5|G|4074
9QQB|1|B5|G|4075
9QQB|1|B5|G|4076

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BD

Large ribosomal subunit protein uL18

Chain BT

60S ribosomal protein L21

Chain Bb

60S ribosomal protein L29

Chain Bo

Large ribosomal subunit protein eL42