J4_9R3A_001
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GAGUAAUG*UG*CUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 9R3A|1|A|U|105
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9R3A_001 not in the Motif Atlas
- Homologous match to J4_6CZR_027
- Geometric discrepancy: 0.5802
- The information below is about J4_6CZR_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_35578.2
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9R3A|1|A|G|99
9R3A|1|A|A|100
9R3A|1|A|G|101
9R3A|1|A|U|102
9R3A|1|A|A|103
9R3A|1|A|A|104
9R3A|1|A|U|105
9R3A|1|A|G|106
*
9R3A|1|A|U|213
9R3A|1|A|G|214
*
9R3A|1|A|C|260
9R3A|1|A|U|261
9R3A|1|A|A|262
9R3A|1|A|G|263
*
9R3A|1|A|C|285
9R3A|1|A|C|286
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- Small ribosomal subunit protein uS12
- Chain P
- Small ribosomal subunit protein bS16
- Chain Q
- Small ribosomal subunit protein uS17
Coloring options: