J4_9R9O_008
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 9R9O|1|C1|U|2314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9O|1|C1|C|2192
9R9O|1|C1|U|2193
9R9O|1|C1|G|2194
*
9R9O|1|C1|C|2248
9R9O|1|C1|G|2249
*
9R9O|1|C1|C|2267
9R9O|1|C1|U|2268
9R9O|1|C1|U|2269
9R9O|1|C1|A|2270
9R9O|1|C1|A|2271
9R9O|1|C1|G|2272
9R9O|1|C1|G|2273
9R9O|1|C1|U|2274
9R9O|1|C1|A|2275
9R9O|1|C1|G|2276
*
9R9O|1|C1|U|2310
9R9O|1|C1|G|2311
9R9O|1|C1|A|2312
9R9O|1|C1|A|2313
9R9O|1|C1|U|2314
9R9O|1|C1|G|2315
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain C2
- Small subunit ribosomal RNA; SSU rRNA
- Chain LA
- 60S ribosomal protein L2-A
- Chain Ln
- Large ribosomal subunit protein eL41B
Coloring options: