J4_9RHU_001
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- C(A2M)UUAAA(PSU)C*GCC*G(PSU)GAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 9RHU|1|A1|G|408
- QA status
- Modified nucleotides: A2M, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|C|98
9RHU|1|A1|A2M|99
9RHU|1|A1|U|100
9RHU|1|A1|U|101
9RHU|1|A1|A|102
9RHU|1|A1|A|103
9RHU|1|A1|A|104
9RHU|1|A1|PSU|105
9RHU|1|A1|C|106
*
9RHU|1|A1|G|356
9RHU|1|A1|C|357
9RHU|1|A1|C|358
*
9RHU|1|A1|G|406
9RHU|1|A1|PSU|407
9RHU|1|A1|G|408
9RHU|1|A1|A|409
9RHU|1|A1|C|410
*
9RHU|1|A1|G|432
9RHU|1|A1|G|433
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain P1
- 40S ribosomal protein S4
- Chain T1
- 40S ribosomal protein S8
- Chain W1
- Small ribosomal subunit protein uS17
- Chain i1
- 40S ribosomal protein S23
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