J4_9T6M_013

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

9T6M|1|a|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|C|2285
9T6M|1|a|G|2286
9T6M|1|a|A|2287
9T6M|1|a|A|2288
9T6M|1|a|G|2289
*
9T6M|1|a|U|2343
9T6M|1|a|U|2344
9T6M|1|a|G|2345
9T6M|1|a|A|2346
9T6M|1|a|C|2347
*
9T6M|1|a|G|2370
9T6M|1|a|G|2371
9T6M|1|a|U|2372
*
9T6M|1|a|A|2381
9T6M|1|a|G|2382
9T6M|1|a|G|2383

Current chains

Chain a

23S rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL33

Chain 2

Large ribosomal subunit protein bL35

Chain n

Large ribosomal subunit protein uL18

Chain v

Large ribosomal subunit protein bL27