J4_9TEY_013
3D structure
- PDB id
- 9TEY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDro bound to the terminating Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 9TEY|1|V|A|2288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9TEY_013 not in the Motif Atlas
- Homologous match to J4_7A0S_009
- Geometric discrepancy: 0.2611
- The information below is about J4_7A0S_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9TEY|1|V|C|2285
9TEY|1|V|G|2286
9TEY|1|V|A|2287
9TEY|1|V|A|2288
9TEY|1|V|G|2289
*
9TEY|1|V|U|2343
9TEY|1|V|U|2344
9TEY|1|V|G|2345
9TEY|1|V|A|2346
9TEY|1|V|C|2347
*
9TEY|1|V|G|2370
9TEY|1|V|G|2371
9TEY|1|V|U|2372
*
9TEY|1|V|A|2381
9TEY|1|V|G|2382
9TEY|1|V|G|2383
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL33
- Chain 2
- Large ribosomal subunit protein bL35
- Chain n
- Large ribosomal subunit protein uL18
- Chain v
- Large ribosomal subunit protein bL27
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