J4_9TKR_004

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

9TKR|1|D2|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKR|1|D2|C|268
9TKR|1|D2|C|269
*
9TKR|1|D2|G|370
9TKR|1|D2|A|371
9TKR|1|D2|G|372
9TKR|1|D2|U|373
9TKR|1|D2|A|374
9TKR|1|D2|G|375
*
9TKR|1|D2|U|399
9TKR|1|D2|G|400
9TKR|1|D2|A|401
9TKR|1|D2|A|402
9TKR|1|D2|U|403
9TKR|1|D2|A|404
9TKR|1|D2|U|405
9TKR|1|D2|G|406
*
9TKR|1|D2|C|421
9TKR|1|D2|A|422
9TKR|1|D2|A|423
9TKR|1|D2|G|424

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein bL28

Chain BI

Large ribosomal subunit protein bL9