J4_9W0N_002
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 9W0N|1|1|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9W0N_002 not in the Motif Atlas
- Homologous match to J4_8B0X_006
- Geometric discrepancy: 0.1792
- The information below is about J4_8B0X_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9W0N|1|1|C|601
9W0N|1|1|A|602
9W0N|1|1|A|603
9W0N|1|1|G|604
*
9W0N|1|1|C|624
9W0N|1|1|G|625
9W0N|1|1|A|626
9W0N|1|1|A|627
9W0N|1|1|G|628
*
9W0N|1|1|C|635
9W0N|1|1|G|636
9W0N|1|1|A|637
9W0N|1|1|G|638
*
9W0N|1|1|C|650
9W0N|1|1|G|651
9W0N|1|1|U|652
9W0N|1|1|U|653
9W0N|1|1|A|654
9W0N|1|1|A|655
9W0N|1|1|G|656
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein bL35
- Chain d
- Large ribosomal subunit protein uL4
- Chain l
- Large ribosomal subunit protein uL15
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