J4_9XTC_002

3D structure

PDB id

9XTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class C, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9XTC|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XTC|1|A|G|142
9XTC|1|A|A|143
9XTC|1|A|G|144
*
9XTC|1|A|C|178
9XTC|1|A|A|179
9XTC|1|A|U|180
9XTC|1|A|A|181
9XTC|1|A|A|182
9XTC|1|A|C|183
9XTC|1|A|G|184
*
9XTC|1|A|C|193
9XTC|1|A|C|194
9XTC|1|A|A|195
9XTC|1|A|A|196
9XTC|1|A|A|197
9XTC|1|A|G|198
*
9XTC|1|A|U|219
9XTC|1|A|G|220
9XTC|1|A|C|221

Current chains

Chain A

RNA (1176-MER)

Nearby chains

Chain T

30S ribosomal protein S20