J5_3OW2_003

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAGUG*CGAC*GUUC*GC*GAAAAUC

Length

23 nucleotides

Bulged bases

3OW2|1|0|U|1359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J5_3OW2_003 not in the Motif Atlas

Homologous match to J5_4V9F_003

Geometric discrepancy: 0.0305

The information below is about J5_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J5_56920.1

Basepair signature

cWW-tSH-tSS-tHH-F-F-F-tWS-cWW-cWW-F-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|G|641
3OW2|1|0|G|642
3OW2|1|0|A|643
3OW2|1|0|G|644
3OW2|1|0|U|645
3OW2|1|0|G|646
*
3OW2|1|0|C|759
3OW2|1|0|G|760
3OW2|1|0|A|761
3OW2|1|0|C|762
*
3OW2|1|0|G|902
3OW2|1|0|U|903
3OW2|1|0|U|904
3OW2|1|0|C|905
*
3OW2|1|0|G|1300
3OW2|1|0|C|1301
*
3OW2|1|0|G|1354
3OW2|1|0|A|1355
3OW2|1|0|A|1356
3OW2|1|0|A|1357
3OW2|1|0|A|1358
3OW2|1|0|U|1359
3OW2|1|0|C|1360

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain K

50S ribosomal protein L15P

Chain X

50S ribosomal protein L32e