J5_4WQY_021
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CUGG*CUUG*CUGAAC*GGUAAUAG*CGAG
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_4WQY_021 not in the Motif Atlas
- Homologous match to J5_4LFB_001
- Geometric discrepancy: 0.0758
- The information below is about J5_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_70703.1
- Basepair signature
- cWW-F-tWH-F-F-cWW-cWW-cWH-cWH-cWW-tSH-tWH-tHW-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
4WQY|1|DA|C|36
4WQY|1|DA|U|37
4WQY|1|DA|G|38
4WQY|1|DA|G|39
*
4WQY|1|DA|C|403
4WQY|1|DA|U|404
4WQY|1|DA|U|405
4WQY|1|DA|G|406
*
4WQY|1|DA|C|436
4WQY|1|DA|U|437
4WQY|1|DA|G|438
4WQY|1|DA|A|439
4WQY|1|DA|A|441
4WQY|1|DA|C|442
*
4WQY|1|DA|G|492
4WQY|1|DA|G|493
4WQY|1|DA|U|494
4WQY|1|DA|A|495
4WQY|1|DA|A|496
4WQY|1|DA|U|498
4WQY|1|DA|A|499
4WQY|1|DA|G|500
*
4WQY|1|DA|C|545
4WQY|1|DA|G|546
4WQY|1|DA|A|547
4WQY|1|DA|G|548
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DD
- 30S ribosomal protein S4
- Chain DL
- 30S ribosomal protein S12
- Chain DZ
- 50S ribosomal protein L9,Elongation factor G
Coloring options: