J5_5AN9_002
3D structure
- PDB id
- 5AN9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanism of eIF6 release from the nascent 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUGA*UUUG*CA*UG*CAGAAAA
- Length
- 19 nucleotides
- Bulged bases
- 5AN9|1|N|G|2684, 5AN9|1|N|A|3132, 5AN9|1|N|G|3133, 5AN9|1|N|A|3134
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_5AN9_002 not in the Motif Atlas
- Homologous match to J5_8C3A_006
- Geometric discrepancy: 0.2681
- The information below is about J5_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AN9|1|N|U|2682
5AN9|1|N|U|2683
5AN9|1|N|G|2684
5AN9|1|N|A|2685
*
5AN9|1|N|U|2944
5AN9|1|N|U|2945
5AN9|1|N|U|2946
5AN9|1|N|G|2947
*
5AN9|1|N|C|2960
5AN9|1|N|A|2961
*
5AN9|1|N|U|2983
5AN9|1|N|G|2984
*
5AN9|1|N|C|3131
5AN9|1|N|A|3132
5AN9|1|N|G|3133
5AN9|1|N|A|3134
5AN9|1|N|A|3135
5AN9|1|N|A|3136
5AN9|1|N|A|3137
Current chains
- Chain N
- 26S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: