J5_7AZS_015
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAG*CGUGC*GAG*CA*UG
- Length
- 15 nucleotides
- Bulged bases
- 7AZS|1|23SB|A|559, 7AZS|1|23SB|U|587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7AZS_015 not in the Motif Atlas
- Homologous match to J5_9DFE_003
- Geometric discrepancy: 0.0851
- The information below is about J5_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_43153.6
- Basepair signature
- cWW-cWW-cWW-F-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|23SB|C|558
7AZS|1|23SB|A|559
7AZS|1|23SB|G|560
*
7AZS|1|23SB|C|585
7AZS|1|23SB|G|586
7AZS|1|23SB|U|587
7AZS|1|23SB|G|588
7AZS|1|23SB|C|589
*
7AZS|1|23SB|G|602
7AZS|1|23SB|A|603
7AZS|1|23SB|G|604
*
7AZS|1|23SB|C|1310
7AZS|1|23SB|A|1311
*
7AZS|1|23SB|U|2042
7AZS|1|23SB|G|2043
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L20B
- 50S ribosomal protein L20
- Chain L21B
- 50S ribosomal protein L21
- Chain L22B
- 50S ribosomal protein L22
- Chain L32B
- 50S ribosomal protein L32
- Chain L4B
- 50S ribosomal protein L4
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