J5_7MSC_001
3D structure
- PDB id
- 7MSC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- CGAUGAAG*CGAAUG*CA*UAC*GAG
- Length
- 22 nucleotides
- Bulged bases
- 7MSC|1|A|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7MSC_001 not in the Motif Atlas
- Homologous match to J5_9DFE_001
- Geometric discrepancy: 0.1007
- The information below is about J5_9DFE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_01737.2
- Basepair signature
- cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7MSC|1|A|C|47
7MSC|1|A|G|48
7MSC|1|A|A|49
7MSC|1|A|U|50
7MSC|1|A|G|51
7MSC|1|A|A|52
7MSC|1|A|A|53
7MSC|1|A|G|54
*
7MSC|1|A|C|116
7MSC|1|A|G|117
7MSC|1|A|A|118
7MSC|1|A|A|119
7MSC|1|A|U|120
7MSC|1|A|G|121
*
7MSC|1|A|C|130
7MSC|1|A|A|131
*
7MSC|1|A|U|150
7MSC|1|A|A|151
7MSC|1|A|C|152
*
7MSC|1|A|G|178
7MSC|1|A|A|179
7MSC|1|A|G|180
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain T
- 50S ribosomal protein L23
Coloring options: