J5_7MSZ_014
3D structure
- PDB id
- 7MSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAG*CGAACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7MSZ|1|a|A|104, 7MSZ|1|a|C|351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7MSZ_014 not in the Motif Atlas
- Homologous match to J5_4LFB_002
- Geometric discrepancy: 0.1119
- The information below is about J5_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_58574.2
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7MSZ|1|a|C|61
7MSZ|1|a|A|62
7MSZ|1|a|A|63
7MSZ|1|a|G|64
*
7MSZ|1|a|C|101
7MSZ|1|a|G|102
7MSZ|1|a|A|103
7MSZ|1|a|A|104
7MSZ|1|a|C|105
7MSZ|1|a|G|106
7MSZ|1|a|G|107
7MSZ|1|a|G|108
*
7MSZ|1|a|C|313
7MSZ|1|a|A|314
7MSZ|1|a|C|315
*
7MSZ|1|a|G|336
7MSZ|1|a|A|337
7MSZ|1|a|C|338
*
7MSZ|1|a|G|349
7MSZ|1|a|G|350
7MSZ|1|a|C|351
7MSZ|1|a|A|352
7MSZ|1|a|G|353
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
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