3D structure

PDB id
7N31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
UUUA*UUUG*CU*AG*CGGAUAAAA
Length
21 nucleotides
Bulged bases
7N31|1|23|U|2076, 7N31|1|23|G|2428, 7N31|1|23|G|2429, 7N31|1|23|A|2430, 7N31|1|23|U|2431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J5_7N31_009 not in the Motif Atlas
Homologous match to J5_4WF9_007
Geometric discrepancy: 0.071
The information below is about J5_4WF9_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J5_39529.1
Basepair signature
cWW-cWH-cWH-F-cWW-F-F-cWW-F-cWW-cWW
Number of instances in this motif group
3

Unit IDs

7N31|1|23|U|2074
7N31|1|23|U|2075
7N31|1|23|U|2076
7N31|1|23|A|2077
*
7N31|1|23|U|2243
7N31|1|23|U|2244
7N31|1|23|U|2245
7N31|1|23|G|2246
*
7N31|1|23|C|2258
7N31|1|23|U|2259
*
7N31|1|23|A|2281
7N31|1|23|G|2282
*
7N31|1|23|C|2427
7N31|1|23|G|2428
7N31|1|23|G|2429
7N31|1|23|A|2430
7N31|1|23|U|2431
7N31|1|23|A|2432
7N31|1|23|A|2433
7N31|1|23|A|2434
7N31|1|23|A|2435

Current chains

Chain 23
23S rRNA

Nearby chains

Chain Dt
Transfer RNA; tRNA
Chain LB
50S ribosomal protein L2
Chain LO
50S ribosomal protein L15
Chain La
50S ribosomal protein L27
Chain Lb
50S ribosomal protein L28
Chain Lg
50S ribosomal protein L33
Chain Li
50S ribosomal protein L35

Coloring options:


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