J5_7QGU_005
3D structure
- PDB id
- 7QGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the B. subtilis disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.75 Å
Loop
- Sequence
- GCAAAAUGA*UG*CC*GUGAAUAGG*CAC
- Length
- 25 nucleotides
- Bulged bases
- 7QGU|1|A|G|1787, 7QGU|1|A|G|1792
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7QGU_005 not in the Motif Atlas
- Homologous match to J5_4WF9_005
- Geometric discrepancy: 0.1521
- The information below is about J5_4WF9_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_99177.1
- Basepair signature
- cWW-F-F-F-cWW-F-F-F-F-F-F-F-F-F-cWW-F-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
7QGU|1|A|G|1719
7QGU|1|A|C|1720
7QGU|1|A|A|1721
7QGU|1|A|A|1722
7QGU|1|A|A|1723
7QGU|1|A|A|1724
7QGU|1|A|U|1725
7QGU|1|A|G|1726
7QGU|1|A|A|1727
*
7QGU|1|A|U|1751
7QGU|1|A|G|1752
*
7QGU|1|A|C|1780
7QGU|1|A|C|1781
*
7QGU|1|A|G|1785
7QGU|1|A|U|1786
7QGU|1|A|G|1787
7QGU|1|A|A|1788
7QGU|1|A|A|1789
7QGU|1|A|U|1790
7QGU|1|A|A|1791
7QGU|1|A|G|1792
7QGU|1|A|G|1793
*
7QGU|1|A|C|2017
7QGU|1|A|A|2018
7QGU|1|A|C|2019
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain W
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: