J5_7TTU_002
3D structure
- PDB id
- 7TTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAG*CGUGC*GAA*UG*CA
- Length
- 15 nucleotides
- Bulged bases
- 7TTU|1|1|A|577, 7TTU|1|1|U|605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7TTU_002 not in the Motif Atlas
- Homologous match to J5_4WF9_003
- Geometric discrepancy: 0.1139
- The information below is about J5_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_43153.6
- Basepair signature
- cWW-cWW-cWW-F-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7TTU|1|1|U|576
7TTU|1|1|A|577
7TTU|1|1|G|578
*
7TTU|1|1|C|603
7TTU|1|1|G|604
7TTU|1|1|U|605
7TTU|1|1|G|606
7TTU|1|1|C|607
*
7TTU|1|1|G|620
7TTU|1|1|A|621
7TTU|1|1|A|622
*
7TTU|1|1|U|1299
7TTU|1|1|G|1300
*
7TTU|1|1|C|2044
7TTU|1|1|A|2045
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
- Chain D
- 50S ribosomal protein L21
- Chain E
- 50S ribosomal protein L22
- Chain N
- 50S ribosomal protein L32
- Chain V
- 50S ribosomal protein L13
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