J5_7ZUW_008
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GC*GCAGAUC
- Length
- 23 nucleotides
- Bulged bases
- 7ZUW|1|5|U|1437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7ZUW_008 not in the Motif Atlas
- Homologous match to J5_8C3A_002
- Geometric discrepancy: 0.0644
- The information below is about J5_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZUW|1|5|G|659
7ZUW|1|5|G|660
7ZUW|1|5|A|661
7ZUW|1|5|G|662
7ZUW|1|5|U|663
7ZUW|1|5|C|664
*
7ZUW|1|5|G|800
7ZUW|1|5|G|801
7ZUW|1|5|A|802
7ZUW|1|5|C|803
*
7ZUW|1|5|G|942
7ZUW|1|5|U|943
7ZUW|1|5|U|944
7ZUW|1|5|C|945
*
7ZUW|1|5|G|1376
7ZUW|1|5|C|1377
*
7ZUW|1|5|G|1432
7ZUW|1|5|C|1433
7ZUW|1|5|A|1434
7ZUW|1|5|G|1435
7ZUW|1|5|A|1436
7ZUW|1|5|U|1437
7ZUW|1|5|C|1438
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BK
- 60S ribosomal protein L13-A
- Chain BM
- Ribosomal protein L15
- Chain BZ
- 60S ribosomal protein L28
- Chain Bd
- RPL32 isoform 1
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