J5_8B0X_008
3D structure
- PDB id
- 8B0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 70S ribosome in the unrotated state (P and E, tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- GAAAGACC*GGA(H2U)AACA*UCG(2MA)(PSU)GU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 8B0X|1|a|A|2066, 8B0X|1|a|A|2452, 8B0X|1|a|H2U|2453, 8B0X|1|a|U|2613
- QA status
- Modified nucleotides: H2U, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B0X|1|a|G|2061
8B0X|1|a|A|2062
8B0X|1|a|A|2063
8B0X|1|a|A|2064
8B0X|1|a|G|2065
8B0X|1|a|A|2066
8B0X|1|a|C|2067
8B0X|1|a|C|2068
*
8B0X|1|a|G|2450
8B0X|1|a|G|2451
8B0X|1|a|A|2452
8B0X|1|a|H2U|2453
8B0X|1|a|A|2454
8B0X|1|a|A|2455
8B0X|1|a|C|2456
8B0X|1|a|A|2457
*
8B0X|1|a|U|2504
8B0X|1|a|C|2505
8B0X|1|a|G|2506
8B0X|1|a|2MA|2507
8B0X|1|a|PSU|2508
8B0X|1|a|G|2509
8B0X|1|a|U|2510
*
8B0X|1|a|G|2587
8B0X|1|a|U|2588
8B0X|1|a|U|2589
8B0X|1|a|U|2590
8B0X|1|a|A|2591
8B0X|1|a|G|2592
*
8B0X|1|a|C|2610
8B0X|1|a|G|2611
8B0X|1|a|G|2612
8B0X|1|a|U|2613
8B0X|1|a|C|2614
8B0X|1|a|C|2615
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain Z
- Transfer RNA; tRNA
- Chain c
- 50S ribosomal protein L2
- Chain d
- 50S ribosomal protein L3
- Chain e
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
- Chain l
- 50S ribosomal protein L16
- Chain r
- 50S ribosomal protein L22
- Chain z
- 50S ribosomal protein L32
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