J5_8UXB_002
3D structure
- PDB id
- 8UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CGUAC*GGG*CA*UG
- Length
- 15 nucleotides
- Bulged bases
- 8UXB|1|1|A|532, 8UXB|1|1|U|562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UXB|1|1|C|531
8UXB|1|1|A|532
8UXB|1|1|G|533
*
8UXB|1|1|C|560
8UXB|1|1|G|561
8UXB|1|1|U|562
8UXB|1|1|A|563
8UXB|1|1|C|564
*
8UXB|1|1|G|577
8UXB|1|1|G|578
8UXB|1|1|G|579
*
8UXB|1|1|C|1261
8UXB|1|1|A|1262
*
8UXB|1|1|U|2017
8UXB|1|1|G|2018
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain S
- 50S ribosomal protein L22
- Chain b
- 50S ribosomal protein L32
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