J5_8UXB_006
3D structure
- PDB id
- 8UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUA*UUUG*CU*AG*CGGAUAAAA
- Length
- 21 nucleotides
- Bulged bases
- 8UXB|1|1|U|2076, 8UXB|1|1|G|2428, 8UXB|1|1|G|2429, 8UXB|1|1|A|2430, 8UXB|1|1|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UXB|1|1|U|2074
8UXB|1|1|U|2075
8UXB|1|1|U|2076
8UXB|1|1|A|2077
*
8UXB|1|1|U|2243
8UXB|1|1|U|2244
8UXB|1|1|U|2245
8UXB|1|1|G|2246
*
8UXB|1|1|C|2258
8UXB|1|1|U|2259
*
8UXB|1|1|A|2281
8UXB|1|1|G|2282
*
8UXB|1|1|C|2427
8UXB|1|1|G|2428
8UXB|1|1|G|2429
8UXB|1|1|A|2430
8UXB|1|1|U|2431
8UXB|1|1|A|2432
8UXB|1|1|A|2433
8UXB|1|1|A|2434
8UXB|1|1|A|2435
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain B
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
- Chain c
- 50S ribosomal protein L33
- Chain e
- 50S ribosomal protein L35
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