J5_8VV4_006
3D structure
- PDB id
- 8VV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUA*UUUG*CU*AG*CGGAUAAAA
- Length
- 21 nucleotides
- Bulged bases
- 8VV4|1|1|U|2076, 8VV4|1|1|G|2428, 8VV4|1|1|G|2429, 8VV4|1|1|A|2430, 8VV4|1|1|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VV4|1|1|U|2074
8VV4|1|1|U|2075
8VV4|1|1|U|2076
8VV4|1|1|A|2077
*
8VV4|1|1|U|2243
8VV4|1|1|U|2244
8VV4|1|1|U|2245
8VV4|1|1|G|2246
*
8VV4|1|1|C|2258
8VV4|1|1|U|2259
*
8VV4|1|1|A|2281
8VV4|1|1|G|2282
*
8VV4|1|1|C|2427
8VV4|1|1|G|2428
8VV4|1|1|G|2429
8VV4|1|1|A|2430
8VV4|1|1|U|2431
8VV4|1|1|A|2432
8VV4|1|1|A|2433
8VV4|1|1|A|2434
8VV4|1|1|A|2435
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- Large ribosomal subunit protein bL27
- Chain X
- 50S ribosomal protein L28
- Chain c
- Large ribosomal subunit protein bL33
- Chain e
- 50S ribosomal protein L35
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