J5_8VVU_006

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUG*CCAU*AUAG

Length

26 nucleotides

Bulged bases

8VVU|1|ZA|C|593

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|C|30
8VVU|1|ZA|U|31
8VVU|1|ZA|U|32
8VVU|1|ZA|G|33
8VVU|1|ZA|U|34
*
8VVU|1|ZA|A|521
8VVU|1|ZA|A|522
8VVU|1|ZA|A|523
8VVU|1|ZA|U|524
8VVU|1|ZA|A|525
8VVU|1|ZA|A|526
8VVU|1|ZA|C|527
*
8VVU|1|ZA|G|558
8VVU|1|ZA|G|559
8VVU|1|ZA|A|560
8VVU|1|ZA|A|561
8VVU|1|ZA|U|562
8VVU|1|ZA|G|563
*
8VVU|1|ZA|C|592
8VVU|1|ZA|C|593
8VVU|1|ZA|A|594
8VVU|1|ZA|U|595
*
8VVU|1|ZA|A|641
8VVU|1|ZA|U|642
8VVU|1|ZA|A|643
8VVU|1|ZA|G|644

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EC

S30

Chain JB

S9

Chain XB

S23