J5_9QQA_003
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAUG*CGAA(PSU)GGC*GA(OMG)*CAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 9QQA|1|A2|U|55, 9QQA|1|A2|A|92, 9QQA|1|A2|C|473
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQA|1|A2|C|53
9QQA|1|A2|A|54
9QQA|1|A2|U|55
9QQA|1|A2|G|56
*
9QQA|1|A2|C|89
9QQA|1|A2|G|90
9QQA|1|A2|A|91
9QQA|1|A2|A|92
9QQA|1|A2|PSU|93
9QQA|1|A2|G|94
9QQA|1|A2|G|95
9QQA|1|A2|C|96
*
9QQA|1|A2|G|435
9QQA|1|A2|A|436
9QQA|1|A2|OMG|437
*
9QQA|1|A2|C|458
9QQA|1|A2|A|459
9QQA|1|A2|C|460
*
9QQA|1|A2|G|471
9QQA|1|A2|G|472
9QQA|1|A2|C|473
9QQA|1|A2|A|474
9QQA|1|A2|G|475
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Af
- 40S ribosomal protein S6
- Chain Ah
- 40S ribosomal protein S8
- Chain Ai
- Small ribosomal subunit protein uS4
- Chain Ax
- 40S ribosomal protein S24
- Chain BV
- Ribosomal protein L23
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