J5_9QQA_005
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUG*CGAUGAAG*CGAACG*CG*UAC
- Length
- 22 nucleotides
- Bulged bases
- 9QQA|1|B8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQA|1|B5|G|19
9QQA|1|B5|U|20
9QQA|1|B5|G|21
*
9QQA|1|B8|C|35
9QQA|1|B8|G|36
9QQA|1|B8|A|37
9QQA|1|B8|U|38
9QQA|1|B8|G|39
9QQA|1|B8|A|40
9QQA|1|B8|A|41
9QQA|1|B8|G|42
*
9QQA|1|B8|C|101
9QQA|1|B8|G|102
9QQA|1|B8|A|103
9QQA|1|B8|A|104
9QQA|1|B8|C|105
9QQA|1|B8|G|106
*
9QQA|1|B8|C|113
9QQA|1|B8|G|114
*
9QQA|1|B8|U|136
9QQA|1|B8|A|137
9QQA|1|B8|C|138
Current chains
- Chain B5
- 28S rRNA
- Chain B8
- 5.8S rRNA
Nearby chains
- Chain BN
- Ribosomal protein L15
- Chain BX
- Large ribosomal subunit protein uL23
- Chain Bh
- 60S ribosomal protein L35
- Chain Bj
- Ribosomal protein L37
- Chain Bl
- 60S ribosomal protein L39-like
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