J5_9RHU_005
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GUG*CGAUGAAG*CGAACG*CG*UAC
- Length
- 22 nucleotides
- Bulged bases
- 9RHU|1|C3|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|G|19
9RHU|1|A3|U|20
9RHU|1|A3|G|21
*
9RHU|1|C3|C|35
9RHU|1|C3|G|36
9RHU|1|C3|A|37
9RHU|1|C3|U|38
9RHU|1|C3|G|39
9RHU|1|C3|A|40
9RHU|1|C3|A|41
9RHU|1|C3|G|42
*
9RHU|1|C3|C|101
9RHU|1|C3|G|102
9RHU|1|C3|A|103
9RHU|1|C3|A|104
9RHU|1|C3|C|105
9RHU|1|C3|G|106
*
9RHU|1|C3|C|113
9RHU|1|C3|G|114
*
9RHU|1|C3|U|136
9RHU|1|C3|A|137
9RHU|1|C3|C|138
Current chains
- Chain A3
- 28S rRNA
- Chain C3
- 5.8S rRNA
Nearby chains
- Chain J2
- Ribosomal protein L15
- Chain T2
- Large ribosomal subunit protein uL23
- Chain d2
- 60S ribosomal protein L35
- Chain f2
- Ribosomal protein L37
- Chain h2
- 60S ribosomal protein L39-like
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