J5_9RTU_002

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAG*CGUAC*GGG*CA*UG

Length

15 nucleotides

Bulged bases

9RTU|1|A|A|532, 9RTU|1|A|U|562

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTU|1|A|C|531
9RTU|1|A|A|532
9RTU|1|A|G|533
*
9RTU|1|A|C|560
9RTU|1|A|G|561
9RTU|1|A|U|562
9RTU|1|A|A|563
9RTU|1|A|C|564
*
9RTU|1|A|G|577
9RTU|1|A|G|578
9RTU|1|A|G|579
*
9RTU|1|A|C|1261
9RTU|1|A|A|1262
*
9RTU|1|A|U|2017
9RTU|1|A|G|2018

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain E

50S ribosomal protein L4

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain S

50S ribosomal protein L22