Motif HL_02966.1 Version HL_02966.1 of this group appears in releases 3.88 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 1-37 | 2-8 | 4-16 | 5-15 | 7-13 | 9-11 | 9-30 | |||||||||||||||||||||||||||||||||||||
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1 | HL_4WT8_239 | 4WT8 | 0.0000 | 3 | DV | tRNA | A | 7 | U | 8 | A | 9 | G | 10 | C | 11 | U | 12 | C | 13 | A | 14 | G | 15 | G | 18 | U | 20 | A | 21 | G | 22 | A | 23 | G | 24 | C | 25 | A | 26 | G | 27 | G | 28 | G | 29 | G | 30 | A | 31 | U | 32 | U | 33 | G | 34 | A | 35 | A | 36 | A | 37 | A | 38 | U | 39 | U | 40 | C | 41 | C | 42 | G | 43 | A | 44 | G | 45 | U | 46 | cWW | ntWH | ncWW | ncWW | ncWW | ntSH | ntWS |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUUCCGAGU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUUCCGAG | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: