Motif HL_04032.1 Version HL_04032.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-7 | 2-9 | 3-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V5O_045 | 4V5O | 0.0000 | 1 | BA | SSU rRNA | C | 384 | C | 385 | U | 386 | G | 387 | A | 388 | G | 389 | A | 390 | A | 391 | A | 392 | C | 393 | G | 395 | cWW | ntWH | |||
| 2 | HL_4V88_195 | 4V88 | 0.4120 | 1 | A6 | SSU rRNA | C | 393 | C | 394 | U | 395 | G | 396 | A | 397 | G | 398 | A | 399 | A | 400 | A | 401 | C | 402 | G | 404 | cWW | tWH | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUGAGAAACGG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGAGAAACG | 2 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-R-tWH-R-tWH-R-R-R
- Heat map statistics
- Min 0.41 | Avg 0.21 | Max 0.41
Coloring options: