#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4 5 6 7 8 91-92-8
1 HL_3DIL_0023DIL0.94460Pseudoknot geometryALysine riboswitchU93U94C95C96U97C98C99C100G101cWW
2 HL_3D0U_0023D0U0.93420Pseudoknot geometryALysine riboswitchU90U91C92C93U94C95C96C97G98cWW
3 HL_3SUX_0013SUX0.00001X THF riboswitchA38C39G41G42G43A44G45U46U47ncWWncWW
4 HL_3SUX_0033SUX0.00001X THF riboswitchA38||||17_555C39||||17_555G41||||17_555G42||||17_555G43||||17_555A44||||17_555G45||||17_555U46||||17_555U47||||17_555ncWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUCCUCCCG2
ACGGGGAGUU2
Non-Watson-Crick part of the motif
SequenceCounts
UCCUCCC2
CGGGGAGU2

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Pseudoknot geometry (2)
  • (2)
  • Basepair signature
    cWW-cWW-R-R-R-R
    Heat map statistics
    Min 0.09 | Avg 0.48 | Max 0.94
    Help

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