Motif HL_11410.1 Version HL_11410.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3TS2_002 | 3TS2 | 0.0000 | 9 | V | RNA (24-mer) | U | 5 | C | 6 | A | 16 | cWW | |
| 2 | HL_3TS2_001 | 3TS2 | 0.1685 | 9 | U | RNA (24-mer) | U | 5 | C | 6 | A | 16 | cWW | |
| 3 | HL_2Y9H_003 | 2Y9H | 0.2180 | 3 | F | RNA (19-mer) | C | 11 | G | 12 | G | 16 | cWW | |
| 4 | HL_6IV9_001 | 6IV9 | 0.8696 | 3 | B | crRNA (50-MER) | A | -21 | A | -20 | U | -16 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUAUGAUACCA | 2 |
| CGCGUG | 1 |
| AAAUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAUGAUACC | 2 |
| GCGU | 1 |
| AAUU | 1 |
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