Motif HL_12289.1 Version HL_12289.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6IV9_001 | 6IV9 | 0.0000 | 1 | B | crRNA (50-MER) | A | -21 | A | -20 | A | -19 | U | -18 | U | -16 | cWW | |
| 2 | HL_6DLR_001 | 6DLR | 0.9883 | 1 | UNCG variation | A | Guanidine-I riboswitch | C | 27 | U | 28 | U | 29 | C | 30 | G | 32 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAUUU | 1 |
| CUUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUU | 1 |
| UUCG | 1 |
- Annotations
-
- UNCG variation (1)
- (1)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.99 | Avg 0.49 | Max 0.99
Coloring options: